MOCAR : Recherche de motifs caractéristiques
dans des classes de séquences Fasta
1. Lecture et vérification des données
67 lignes lues soit 22 séquences.
2. Exécution du programme de recherche de motifs
Durée d'exécution : 1 seconde(s).
3. Choix des classes affichées
Toutes les classes Classe 2 4. Motifs communs
Classe Motif classe 2 NPN * V@V * NPN * 5. Détail par classe et par séquence Fasta
Global Local Identifiant ....+...10....+...20....+...30....+...40....+...50....+...60....+...70....+...80....+...90....+..100....+..110....+..120....+..130....+..140....+..150....+..160....+..170....+..180....+..190....+..200....+..210....+..220....+..230....+..240....+..250....+..260....+..270....+..280....+..290....+..300....+..310....+..320....+..330....+..340....+..350....+..360....+..370....+..380....+..390....+..400....+..410....+ Identifiant 1 1 ABS24299_2 MKKTFALALLALTGAGCAGLSDLARVAFEEPKLSFRSASVEALDLEGATIGVKFDLENPNGFGLDVARVGWGVEVEGTRVATGDMPGGLAIPAKGVAPLTIPVRVRYQDVPGIVGLLTSRRDAIGYRLSGKVGVRTPIGIVDLPVSHSDRVALPSLPSFSLEGVSLRTASFTDMALDVKLRVKNPNAFPIPAGSLDYALSLAGTEVVRAQDTALARVAGGAAQIVSIPVRVSVLKAGRAATELARGAPVQLGLAGTADVAGIPVPLDLAATVPARR ABS24299_2 2 2 ACG71329_2 MRSLRLLALTSIVALSGCAALNQLAASAFEKPKLTFRSATLQSLDLEGATLGFQFDLENPNGFGLTLARLGYGVEVEGTRIAAGDMPGGLKIPAAGKAPVTFPVRVRFKDVPGIVSLLGRQQESIRYKLGGTVGVSTPVGVVDLPISHEDSLKLPRLPGFTLEGLSVRSVSLSDLALDVKLRVKNPNAFAIPSGTLDSAVSLAGSQVGRIDGRALAAVPAQGSTVLTIPLKVDLLRAGRAASELMRGAPVDVGMRGTADLGGLPVPLDLGGRVPVAK ACG71329_2 3 3 EMS63241_2 MSSSSDNPNTVTDRGLFSKSSKDDGADKKKKQEEKKEDGEEGGGGFIDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLVDIDYLIDSDGRKLVAGLIPDAGTIRAHGEETVKVPITLDFDDIRSTYADIKPGSIIPYLLRVIFLVDVPVFGRIKIPLDKSGEIPIPYKPDVDVDKIKFHHFSFEETTATIHLSLENKNDFDLGLNLLQYEMWLGDDSVVEAELTDSTRIEKQGITKMQIPFTFRPKDLGSAVWDMIRGRGTGYSIKGKIDVDTPFGNMKLPIDKVGGTTRLKKDDDDDDVHQLDQASPVLTRIIDNARN EMS63241_2 4 4 NP_248130_2 MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALVGGDKIYLGHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKIPIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQLNNLNPNQIQSIAQ NP_248130_2 5 5 Q2IM26_2 MGVASGAPPSRGRGTTTPMRSLRLLALTSIVALSGCAALNQLAASAFEKPKLTFRSATLQSLDLEGATLGFQFDLENPNGFGLTLARLGYGVEVEGTRIAAGDMPGGLKIPAAGKAPVTFPVRVRFKDVPGIVSLLGRQQDSIRYKLGGTVGVSTPVGVVDLPISHEDSLKLPRLPGFTLEGLSVRSVSLSDLALDVKLRVKNPNAFAIPSGTLDSAVSLAGSQVGRIDGRALAAVPAQGSTVLTIPLKVDLVRAGRAASELMRGAPVDVGMRGTADLGGLPVPLDVGGRVPVAR Q2IM26_2 6 6 WP_002972629_2 MVDVRVDLKPNPNFPLIPLVDLYPQVSVENPNDTKVSIYKFDLEIQLITANGKEYIGKLQNETPLEVEPISKSTVVLKLIPEQKQSILPKLLLLARQLSEAARRGEDAEFEIYGTVEVDSVFGKLPIPVREISRIKLKK WP_002972629_2 7 7 WP_002977071_2 MVRRILFLFAFVSSFSFNHCLSDTKKNLESLKACKFDLVDVRIDLKPNPNFPIIPLVDLYPQVSVQNPNDTKVSIYQFDLEIQLITANGKEYIGKLQNESPLEVEPKSESLVVLKLIPEQKQSILPKLLLLARQLSEAAKRGEEAEFEIYGTVEVDSVFGKLPIPVREVSRIKLKK WP_002977071_2 8 8 WP_015682283_2 MVRRILFLFTFLSFASFTHCLSDTKKNLESLKACKFDLVDVRVDLKPNPNFPIIPLVDLYPQVSVENPNETKVSIYKFDLEIQLITANGKEYIGKLQNETPLEVEPKATSTVVLKLIPEQKQSILPKLLLLARQLSEAAKRGEEAEFEIYGTVEVDSAFGKLPIPVREVSRIKLKK WP_015682283_2 9 9 YP_002132783_2 MRPLGHAALAALAALLALAVACGGRAARTPPLAVDPPAFRPEALLPTGADAYGVALALSGRIENPNPVALPVAGFTYAFEVMGAAAGGGQVASDLVLPAGGALPVTVPVRLRWADVPGFLEALATRPSVPVTVSGAARVRAGDGTVAAPYRIDGSVVLPRLPTVTLADAVVRESTLFHTVVELRMSVRNPNPFPLPTGRLSYDLRVSGVPVIQAAKSALDAVPPQGQATVVVPVRFSTVGAAAGALAGAARGRADLSMSGRAGYGALEVGVDLRGALAAR YP_002132783_2 10 10 YP_002490523_2 MRSLRLLALTSIVALSGCAALNQLAASAFEKPKLTFRSATLQSLDLEGATLGFQFDLENPNGFGLTLARLGYGVEVEGTRIAAGDMPGGLKIPAAGKAPVTFPVRVRFKDVPGIVSLLGRQQESIRYKLGGTVGVSTPVGVVDLPISHEDSLKLPRLPGFTLEGLSVRSVSLSDLALDVKLRVKNPNAFAIPSGTLDSAVSLAGSQVGRIDGRALAAVPAQGSTVLTIPLKVDLVRAGRAASELMRGAPVDVGMHGTADLGGLPLPLDLGGRVPVAK YP_002490523_2 11 11 YP_002490836_2 MRPLGHAALAALAALLALTVACGGRAVRTPPLAVDPPAFRPEALLPTGADAYGVALALSGRIENPNPVALPVAGFTYAFEVMGAPAGGGQVASDLVLPAGGAVPVTVPVRLRWADVPGFLEALATRPAVPVTVSGAARVRAGGGTVAAPYRIDGSVVLPRLPTVTLADAVVRESTLFHTVVELRVSVRNPNPFPLPTGRLSYDLSVSGVPVIQAAKSPLDAVPPQGQATVVVPVRFSTVGAAAGALAGAVRGRADLSMSGRAGYGALEVGVDLRGALAAR YP_002490836_2 12 12 YP_004527766_2 MQTRKSVIMLLAALLGLSVFSCQSLSGILQEPKLSVKSVDLAGISLKGVDLICRINVENPNGFDIPFPKIDWKVFVNEASFVNGILNQGTKITKRNTVTVDVPFSVTYEGLYKTFTSLWETKEAAYNIALGISFPLPVLQDKVYNLDFSGVLPLLQLPKLSPGSIRIGKIDFSGIELACGFNVDNPNNFPIPFPKVDWEYGVNGATLLTSSIVAGKEIAANAKGQADINVSLKYEDVIKAIGSLGNSGEAKSLMSLVSSLSVPGLEDVKDMLDIPGLLPILQKPNVAVKGINIKNLGLQKLEFVINWEVENKNSFAMDIGKFNYNFKVNNNNWAQGFLETPPKLKPNTKTAIPLSVTISSLDMVKDLVGIISAGTSVNYSCLGDMSLLSDFPGLDKLELPLNLTGSTRLVR YP_004527766_2 13 13 YP_463597_2 MRPLGHAALAALVALAAACGGRAARTPPLAIDPPAFRPEALLPTGADAYGVALALSGRIENPNPVALPVAGFTYAFEVMGAPAGGGQVASELVLPAGGAVPVTVPVRLRWADVPGFLEALATRPSLPVTVSGAARVRAGGGTVAVPYRMDGSVVLPRLPSVTLADAVVRESTLFHTVVELRVSVRNPNPFPLPTGRLSYDLSVSGVPVIQAAKSALDAVPPQGQATVVVPVRFSTVGAAAGALAGAVRGRADLSVSGRAGYGALEVGVDLRGALAAR YP_463597_2 14 14 ZP_21583775_2 MALNRIVSALTAGKLRIAVVGLLVVAAAVGGAFALGVVGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGVGLDGVSIDYTVSMNDVEMASGGREGVSVASGNSSIAFETDLENDAIPPWWTSHVENDEQTTVAIDATVTSDLLGRSANLTRTRQVETDLIGAFTSDETRPVNADAPLVDDPVLYVNETRGRWGTVSKEETPIEMEFDAYNPNLEPYVVTEIGYDVTMNGVAMGSGSTEEEYVIPSYGSETVELSAALRNERLDEWWVTHLNESVNGHQVSDLRIEFYAVVELPSGEELTVPLDALTYEETVETDIFDEGLDRGEGSDTGDSTDAGGSDDGGSASDDGGATDDGENTSDDGGSTSADDNTTDDGNTSDDDSGDDGGLLPLAADR ZP_21583775_2 15 15 ZP_21590999_2 MNPSDVLSALVSSKLRIALVGVLVVVGAVGGAFVLGILGVPSVAAVDNTFGDVTNETTEIETDLVVSNPNPVGIGLDGVSVNYTVSMNGIEMAQGGREGVSVGTGNSTLELETRLRNDGIPPWWVSHVRNGERTTLDIDATATSDRLGRGVDFSRSREIQTDLLGAFNSDETRPVNADSPFVSDPVLYVNETRGEWGTVSESETPIEMAFTVYNPNFEPYAVTEIGYDITMNGVAMGSGQTDEGYVIPSESTETVEFTTALQNRHLDDWWVTHLDEDVRGHQVTDLRIEFYAVIEFPTGEETTIPLDALTYEERIETDIFGEGDDVRNGTDSSGNGSDSDAGNETDGDSSDGDATDDGNQADDSDGGTTDGTDDGSDDGTENGTDDGSGDDDDGVLPV ZP_21590999_2 16 16 ZP_21592785_2 MALNRIVSALTAGKLRIAVVGLLVVAAAVGGAFALGVVGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGVGLDGVSIDYTVSMNDVEMASGGREGVSVASGNSSIAFETDLENDAIPPWWTSHVENDERTTVAIDATVTSDLLGRSANLTRTRQVETDLIGAFTSDETRPVNADAPLVDDPVLYVNETRGRWGTVSEEETPIEMEFDAYNPNLEPYVVTEIGYDVTMNGVAMGSGSTEEEYVIPSYGSETVELSAALRNERLDEWWVTHLNESDNGHQVSDLRIEFYAVVELPSGEELTVPLDALTYEETVETDIFDEGLDRGEGSDTGDSTDAEGSDDGGSASDDGGATDDGENTSDDGGSTSADDNTTDDGNTSDDDSGDDGGLLPLAADR ZP_21592785_2 17 17 ZP_21594672_2 MIVGGVLSTLTSSKLRIALVGLLVVGSGVGGAFAVGILGVPGVAAVDNTFGDATNETTAIETDLVVSNPNPVGIGLDGVSVSYTVSMNDIEMAQGGREGVRIDAENSTLELETQLRNDGIPAWWVSHVRNGERTTLDIDATATSDRLGRGVDFSRSREIQTDLLGAFNSDETRPVNADSPLTSDPVLYVNETRSEWGTFSESETPIEMAFTVYNPNLEPYAVTEIGYDITMNGVEMGSGQTEEGYVIPSRSTETIEFSTGLENRRLDDWWVTHLDEDVRGHQVTGLRIEFYAVIEFPTGEEATIPLDALTYEETIETDIFGEGDDVRETNESGSSADESGPGDGGSETDDTGDSGTETDDTGDSGTETDDGDDATKNETDDSNDGTENGSDDDDDGVLPL ZP_21594672_2 18 18 ZP_21601656_2 MNLRAVASAALSTKGRIALVGLLLVGGTVGGAFAAGLLGVPSVAAMNNTFGEVTNETTTIETDLVVSNPNPVGIGLDDVSVNYTVSMNDIEMAQGGREGVRVGTGNSTLGLETEMRNEAIPPWWVSHVRNGERTTIDIDATVTSERLGRSVDFSRTREIDTDLLGAFNSDETRPVNADSAFTDDPILYVNETRGEWGSVSESETPIDMAFTVHNPNLEPYVVSEIGYDVTMNGVEMASGQTDEGYVIPSRSSETIEFTTALQNRHLDEWWVTHLDEEVRGHQASDLRIEFYAVIELPSGTELTVPLDELTYEETIETDIFDEGDAVRDSDETGADGSTEDDGSSDGTDDGSSNGTDGGSSNETDGSTDDGSAGDDTDDTNGDSENETDGSDDDSDSDDDGILPL ZP_21601656_2 19 19 ZP_21605626_2 MALNRIVSALTAGKLRIAVVGLLVVAAAVGGAFALGVVGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGVGLDGVSIDYTVSMNDVEMASGGREGVSVASGNSSIAFETDLENDAIPPWWTSHVENDERTTVAIDATVTSDLLGRSANLTRTRQVETDLIGAFTSDETRPVNADAPLVDDPVLYVNETRGRWGTVSEEETPIEMEFDAYNPNLEPYVVTEIGYDVTMNGVAMGSGSTEEEYVIPSYGSETVELSAALRNERLDEWWVTHLDESVNGHQVSDLRIEFYAVVELPSGEELTVQLDALTYEETIETDIFDEGLDRGKGSDTGNSADSDGGDNTSDDGTSDDGGNTSDGGTSDDGGNTTDDDSGDDDDGLLPLVVGR ZP_21605626_2 20 20 ZP_21609447_2 MALKGIVSALTAGKLRIALVGLLVVAAAVGGAFALGVLGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGIGLDGVSVNYTVSMNDVEMARGGREGVSVASGNSSLAFETELDNDAIPPWWTSHVRNGERTTVAIDARVTSDLLGRGTNLTRTREIETDLIGAFTSEETRPVNADAPLVDDPVLYVNETRGRWGTVSEAETPIEMEFDVYNPNLEPYVVSEIGYDVTMNGVEMGSGSTEEEYVIPSYGSETVELSAALRNERLDDWWVTHLNESDNGHQVSDLQIEFYAVVELPGGESVTVPLDALTYEETIETDIFDEGIDRGEEADDGNTTDSDGSGDGTSDDGTTTDDGGTSDGDTSDGNTGDDGTSDDNTTNGDNTTDDDSGDDDGGLLPLAVDR ZP_21609447_2 21 21 ZP_21616806_2 MALNRIVSALTAGKLRIAVVGLLVVAAAVGGAFALGVVGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGVGLDGVSIDYTVSMNDVEMASGGREGVSVASGNSSIAFETDLENDAIPPWWTSHVENDERTTVAIDATVTSDLLGRSANLTRTRQVETDLIGAFTSDETRPVNADAPLVDDPVLYVNETRGRWGTVSEEETPIEMEFDAYNPNLEPYVVSEIGYDVTMNGVEMGSGSTDEEYVIPSYGSETVELSAALRNERLDEWWVTHLNESVNGHQVSDLRIEFYAVVELPSGEELTVPLDALTYEETVETDIFDEGLDRGEGSDTGDSTDAEGSDDGENTSDGGSTSADDNTTDDGDSGDDSGDDGGLLPLAADR ZP_21616806_2 22 22 ZP_21619884_2 MALNRIVSALTAGKLRIAVVGLLVVAAAVGGAFALGVVGVPSVAAVNNSFGDVTNETTVVETDLVVSNPNPIGVGLDGVSIDYTVSMNDVEMASGGREGVSVASGNSSIAFETDLENDAIPPWWTSHVENDERTTVAIDATVTSDLLGRSANLTRTRQVETDLIGAFTSDETRPVNADAPLVDDPVLYVNETRGRWGTVSEEETPIEMEFDAYNPNLEPYVVSEIGYDVTMNGVEMGSGSTDEEYVIPSYGSETVELSAALRNERLDEWWVTHLNESVNGHQVSDLRIEFYAVVELPSGEELTVPLDALTYEETVETDIFDEGLDRGEGSDTGDSTDAEGSDDGENTSDGGSTSADDNTTDDGDSGDDSGDDGGLLPLAADR ZP_21619884_2 Global Local Identifiant ....+...10....+...20....+...30....+...40....+...50....+...60....+...70....+...80....+...90....+..100....+..110....+..120....+..130....+..140....+..150....+..160....+..170....+..180....+..190....+..200....+..210....+..220....+..230....+..240....+..250....+..260....+..270....+..280....+..290....+..300....+..310....+..320....+..330....+..340....+..350....+..360....+..370....+..380....+..390....+..400....+..410....+ Identifiant
Fichier Infos
ouverture du fichier : /tmp/mocar_infosfrp21x
fin de lecture du fichier : /tmp/mocar_infosfrp21x
numero de classe: 2
nombre d'erreurs autorises: 0
mode sous-sequence active: oui
mode negation active: non
sequence de sortie: NPN*V@V*NPN*
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(gH) à partir du projet en «Licence Pro.» de Julien DUMORTIER, Sylvain ARRACHART, Vincent MAHÉO, Nicolas CHARTIER. Année 2012.
Le programme C++ nommé MOCAR a été conçu par Philippe GALINIER.
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