PPS: predipath prediction simulation Warning: this is only a simulation, not a real site.  Step one :  choose the species Erwinia Ralstonia Xanthomonas Pseudomonas  Step two :  input your example genome       example 1         example 2         example 3         example 4    Step three :  compute!  start computation  Here are the results: Legend: PA plant associated, NPA non plant associated; P pathogenic, NP non pathogenic. KI-S shared kmers, SKIF specific longmers, DBGWAS shared kmers. Class Genomes Predipath-Db SecMetab-Db KI-S SKIF DBGWAS predictor 1 predictor 2 predictor 3 predictor 4 predictor 5 NPA-NP 12 1 84% 85% 61% 98% PA-NP 47 1 63% 97% 74% 95% PA-P 39 1 81% 83% 27% 10% Conclusion: these results tend to show that the pathogenicity can be considered as moderate.

 

 

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